If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 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'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ), 'gf_id' => 'HOM05D000531', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000531' ), 'data_identifier' => 'HOM05D000531', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000531', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1028', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p04390' => 'bna', 'A01p35300' => 'bna', 'A03p41150' => 'bna', 'A04p03570' => 'bna', 'A04p27780' => 'bna', 'A05p02020' => 'bna', 'A05p09580' => 'bna', 'A05p30310' => 'bna', 'A06p03730' => 'bna', 'A06p21990' => 'bna', 'A06p48180' => 'bna', 'A07p23100' => 'bna', 'A09p49670' => 'bna', 'A10p06890' => 'bna', 'Aa31LG10G11700' => 'aar', 'Aa31LG10G4330' => 'aar', 'Aa31LG2G16430' => 'aar', 'Aa31LG3G980' => 'aar', 'Aa31LG4G13920' => 'aar', 'Aa31LG5G21400' => 'aar', 'Aa31LG8G6070' => 'aar', 'Aa31sc108G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2941' => 'aag', 'Actinidia00434' => 'ach', 'Actinidia01343' => 'ach', 'Actinidia05437' => 'ach', 'Actinidia07243' => 'ach', 'Actinidia12945' => 'ach', 'Actinidia15632' => 'ach', 'Actinidia17971' => 'ach', 'Actinidia22635' => 'ach', 'Actinidia23284' => 'ach', 'Actinidia24210' => 'ach', 'Actinidia26524' => 'ach', 'Actinidia29873' => 'ach', 'Actinidia37870' => 'ach', 'Actinidia38060' => 'ach', 'Ah.02g117810' => 'amhyb', 'Ah.03g143180' => 'amhyb', 'Ah.04g149950' => 'amhyb', 'Ah.08g217250' => 'amhyb', 'Ah.13g077520' => 'amhyb', 'Ah.15g090900' => 'amhyb', 'Ah.15g091000' => 'amhyb', 'Ah.15g095030' => 'amhyb', 'AL1G53020' => 'aly', 'AL1G57160' => 'aly', 'AL3G32690' => 'aly', 'AL4G32370' => 'aly', 'AL4G39050' => 'aly', 'AL5G22570' => 'aly', 'AL5G38230' => 'aly', 'AL7G17380' => 'aly', 'AL8G17940' => 'aly', 'Aqoxy1G00009' => 'aox', 'Aqoxy4G02789' => 'aox', 'Aqoxy5G01225' => 'aox', 'Aqoxy5G02004' => 'aox', 'Aqoxy5G02071' => 'aox', 'arahy.Tifrunner.gnm1.ann1.1A1ACU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.203Q7N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.207GSN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.49VWUD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.63C1KK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6NN0YE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AWSU0J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9A4XU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D3TLZY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I1HQCQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N4NI2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z3D5KE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZS1FXZ' => 'arhy', 'AT1G45249' => 'ath', 'AT1G49720' => 'ath', 'AT2G36270' => 'ath', 'AT2G41070' => 'ath', 'AT3G19290' => 'ath', 'AT3G44460' => 'ath', 'AT3G56850' => 'ath', 'AT4G34000' => 'ath', 'AT5G42910' => 'ath', 'ATR0009G011' => 'atr', 'ATR0081G055' => 'atr', 'ATR0180G005' => 'atr', 'ATR0307G047' => 'atr', 'ATR0751G118' => 'atr', 'ATR0751G125' => 'atr', 'ATR0820G158' => 'atr', 'Atru.chr12.1118' => 'acertr', 'Atru.chr13.1297' => 'acertr', 'Atru.chr13.703' => 'acertr', 'Atru.chr3.2926' => 'acertr', 'Atru.chr3.3266' => 'acertr', 'Atru.chr3.3275' => 'acertr', 'Atru.chr5.2689' => 'acertr', 'Atru.chr8.1552' => 'acertr', 'AUR62000445' => 'cqu', 'AUR62001422' => 'cqu', 'AUR62006172' => 'cqu', 'AUR62006793' => 'cqu', 'AUR62009948' => 'cqu', 'AUR62013917' => 'cqu', 'AUR62018468' => 'cqu', 'AUR62020955' => 'cqu', 'AUR62028537' => 'cqu', 'BcaB01g01163' => 'bca', 'BcaB02g08345' => 'bca', 'BcaB02g09366' => 'bca', 'BcaB04g19034' => 'bca', 'BcaB04g20711' => 'bca', 'BcaB04g20712' => 'bca', 'BcaB06g28925' => 'bca', 'BcaB07g33652' => 'bca', 'BcaB07g33870' => 'bca', 'BcaC01g02051' => 'bca', 'BcaC01g03638' => 'bca', 'BcaC02g07618' => 'bca', 'BcaC02g09874' => 'bca', 'BcaC02g10793' => 'bca', 'BcaC02g11683' => 'bca', 'BcaC02g11737' => 'bca', 'BcaC02g12749' => 'bca', 'BcaC02g12751' => 'bca', 'BcaC06g31739' => 'bca', 'BcaC07g39995' => 'bca', 'BcaC07g40114' => 'bca', 'BcaC08g42911' => 'bca', 'BcaC08g43159' => 'bca', 'BcaC08g44808' => 'bca', 'BcaC09g48882' => 'bca', 'BcaNung03356' => 'bca', 'BcaNung03786' => 'bca', 'BcaNung05625' => 'bca', 'BNapus_Darmor_BZH_scaffold_239p00030' => 'bna', 'BolC1t00463H' => 'bol', 'BolC1t04451H' => 'bol', 'BolC3t17318H' => 'bol', 'BolC3t19171H' => 'bol', 'BolC4t21886H' => 'bol', 'BolC4t22834H' => 'bol', 'BolC4t22890H' => 'bol', 'BolC4t24006H' => 'bol', 'BolC4t25237H' => 'bol', 'BolC4t28006H' => 'bol', 'BolC4t28381H' => 'bol', 'BolC5t33304H' => 'bol', 'BolC6t35280H' => 'bol', 'BolC6t35573H' => 'bol', 'BolC6t37549H' => 'bol', 'BolC7t46452H' => 'bol', 'BolC8t50826H' => 'bol', 'BraA01t00427Z' => 'bra', 'BraA01t03613Z' => 'bra', 'BraA03t13271Z' => 'bra', 'BraA03t15325Z' => 'bra', 'BraA04t16078Z' => 'bra', 'BraA04t18270Z' => 'bra', 'BraA04t18593Z' => 'bra', 'BraA05t19198Z' => 'bra', 'BraA05t19911Z' => 'bra', 'BraA05t21869Z' => 'bra', 'BraA06t23578Z' => 'bra', 'BraA06t25286Z' => 'bra', 'BraA06t27687Z' => 'bra', 'BraA07t29972Z' => 'bra', 'BraA09t40420Z' => 'bra', 'BraA09t40425Z' => 'bra', 'BraA10t42941Z' => 'bra', 'C01p04790' => 'bna', 'C01p44840' => 'bna', 'C03p50250' => 'bna', 'C03p69170' => 'bna', 'C04p02410' => 'bna', 'C04p11850' => 'bna', 'C04p25050' => 'bna', 'C04p35670' => 'bna', 'C04p65270' => 'bna', 'C04p65280' => 'bna', 'C04p68760' => 'bna', 'C05p45860' => 'bna', 'C06p01480' => 'bna', 'C06p04420' => 'bna', 'C06p23800' => 'bna', 'C07p60120' => 'bna', 'C08p32080' => 'bna', 'CAN.G1030.9' => 'can', 'CAN.G1041.34' => 'can', 'CAN.G128.130' => 'can', 'CAN.G16.11' => 'can', 'CAN.G397.17' => 'can', 'CAN.G714.8' => 'can', 'CAN.G959.45' => 'can', 'CANSAT21G2102' => 'cansat', 'CANSAT25G1033' => 'cansat', 'CANSAT25G2228' => 'cansat', 'CANSAT25G2581' => 'cansat', 'CANSAT54G0673' => 'cansat', 'CANSAT54G1778' => 'cansat', 'CARHR036440' => 'chi', 'CARHR039760' => 'chi', 'CARHR094690' => 'chi', 'CARHR104460' => 'chi', 'CARHR130540' => 'chi', 'CARHR136180' => 'chi', 'CARHR167000' => 'chi', 'CARHR181180' => 'chi', 'CARHR242140' => 'chi', 'Carub.0001s3573' => 'cru', 'Carub.0001s3893' => 'cru', 'Carub.0003s1912' => 'cru', 'Carub.0004s1802' => 'cru', 'Carub.0004s2339' => 'cru', 'Carub.0005s1015' => 'cru', 'Carub.0005s2358' => 'cru', 'Carub.0007s0639' => 'cru', 'Carub.0008s0588' => 'cru', 'Ca_04448_v3' => 'car', 'Ca_06164_v3' => 'car', 'Ca_08335_v3' => 'car', 'Ca_08998_v3' => 'car', 'Ca_14175_v3' => 'car', 'Ca_15945_v3' => 'car', 'Ca_18693_v3' => 'car', 'Ca_24118_v3' => 'car', 'CBR_g2865' => 'cbr', 'CBR_g2925' => 'cbr', 'Cc00_g02380' => 'ccan', 'Cc01_g06960' => 'ccan', 'Cc02_g18860' => 'ccan', 'Cc02_g22080' => 'ccan', 'Cc06_g05680' => 'ccan', 'Cc10_g04070' => 'ccan', 'CDE02G0621' => 'cde', 'CDE02G3807' => 'cde', 'CDE04G2096' => 'cde', 'CDE04G2784' => 'cde', 'CDE06G0358' => 'cde', 'CDE06G2312' => 'cde', 'CDE07G0695' => 'cde', 'CDE08G0322' => 'cde', 'CDE08G0366' => 'cde', 'CDE08G0851' => 'cde', 'CDE08G1274' => 'cde', 'CDE09G1164' => 'cde', 'Cfa004531' => 'cfa', 'Cfa010429' => 'cfa', 'Cfa015944' => 'cfa', 'Cfa016599' => 'cfa', 'Ciclev10001159m.g' => 'ccl', 'Ciclev10001893m.g' => 'ccl', 'Ciclev10003120m.g' => 'ccl', 'Ciclev10012205m.g' => 'ccl', 'Ciclev10013385m.g' => 'ccl', 'Ciclev10016383m.g' => 'ccl', 'Ciclev10028435m.g' => 'ccl', 'Ciclev10028635m.g' => 'ccl', 'CiPaw.05G007300' => 'cil', 'CiPaw.05G041300' => 'cil', 'CiPaw.05G231100' => 'cil', 'CiPaw.06G172000' => 'cil', 'CiPaw.07G061800' => 'cil', 'CiPaw.09G013200' => 'cil', 'CiPaw.10G009100' => 'cil', 'CiPaw.13G048600' => 'cil', 'CiPaw.14G038300' => 'cil', 'CiPaw.16G043000' => 'cil', 'CiPaw.16G043100' => 'cil', 'ClCG02G006020' => 'cla', 'ClCG02G022170' => 'cla', 'ClCG03G014270' => 'cla', 'ClCG08G008570' => 'cla', 'ClCG08G016000' => 'cla', 'ClCG09G014130' => 'cla', 'ClCG10G019030' => 'cla', 'ClCG11G015470' => 'cla', 'COL.COLO4_07159' => 'col', 'COL.COLO4_16511' => 'col', 'COL.COLO4_17906' => 'col', 'COL.COLO4_18347' => 'col', 'COL.COLO4_19889' => 'col', 'COL.COLO4_26519' => 'col', 'COL.COLO4_29760' => 'col', 'COL.COLO4_32646' => 'col', 'Cpa.g.sc1782.2' => 'cpa', 'Cpa.g.sc2.33' => 'cpa', 'Cpa.g.sc33.182' => 'cpa', 'Cpa.g.sc34.221' => 'cpa', 'Cpa.g.sc49.26' => 'cpa', 'Cpa.g.sc5.28' => 'cpa', 'Cpa.g.sc62.4' => 'cpa', 'CsaV3_1G041950' => 'csa', 'CsaV3_2G026630' => 'csa', 'CsaV3_3G037220' => 'csa', 'CsaV3_4G028620' => 'csa', 'CsaV3_6G004560' => 'csa', 'CsaV3_6G015010' => 'csa', 'CsaV3_6G015020' => 'csa', 'CsaV3_6G015030' => 'csa', 'CsaV3_7G008500' => 'csa', 'CSS0000233' => 'camsi', 'CSS0001223' => 'camsi', 'CSS0004885' => 'camsi', 'CSS0013971' => 'camsi', 'CSS0016927' => 'camsi', 'CSS0022293' => 'camsi', 'CSS0046013' => 'camsi', 'CSS0046145' => 'camsi', 'DCAR_003998' => 'dca', 'DCAR_007751' => 'dca', 'DCAR_009107' => 'dca', 'DCAR_009159' => 'dca', 'DCAR_013381' => 'dca', 'DCAR_013520' => 'dca', 'DCAR_019240' => 'dca', 'DCAR_019449' => 'dca', 'DCAR_020616' => 'dca', 'DCAR_020756' => 'dca', 'DCAR_022020' => 'dca', 'DCAR_030609' => 'dca', 'Dinv13066' => 'din', 'Dinv14548' => 'din', 'Dinv15718' => 'din', 'Dinv19338' => 'din', 'Dinv19832' => 'din', 'Dinv21218' => 'din', 'Dinv24251' => 'din', 'Dinv26551' => 'din', 'Dinv29474' => 'din', 'Dinv35954' => 'din', 'Dinv37063' => 'din', 'Dinv39308' => 'din', 'Dinv39309' => 'din', 'Dinv42163' => 'din', 'Duzib041G0378' => 'dzi', 'Duzib052G0417' => 'dzi', 'Duzib052G0839' => 'dzi', 'Duzib093G0082' => 'dzi', 'Duzib093G0546' => 'dzi', 'Duzib106G1670' => 'dzi', 'Duzib114G0671' => 'dzi', 'Duzib116G0550' => 'dzi', 'Duzib128G0257' => 'dzi', 'Duzib128G0513' => 'dzi', 'Duzib132G0361' => 'dzi', 'Duzib150G1531' => 'dzi', 'Duzib168G1922' => 'dzi', 'Duzib168G1934' => 'dzi', 'Duzib170G0046' => 'dzi', 'Duzib248G0228' => 'dzi', 'Duzib248G0788' => 'dzi', 'ECA232G4006' => 'eca', 'ECA236G0644' => 'eca', 'ECA236G1381' => 'eca', 'ECA240G3956' => 'eca', 'ECA247G0993' => 'eca', 'ECA247G2083' => 'eca', 'EL10Ac3g07386' => 'bvu', 'EL10Ac7g16473' => 'bvu', 'EL10Ac7g16925' => 'bvu', 'EL10Ac7g17499' => 'bvu', 'EL10Ac9g22367' => 'bvu', 'Eucgr.A01499' => 'egr', 'Eucgr.A02171' => 'egr', 'Eucgr.F02337' => 'egr', 'Eucgr.G01436' => 'egr', 'Eucgr.H00931' => 'egr', 'Eucgr.I01145' => 'egr', 'Eucgr.J00320' => 'egr', 'Eucgr.J00637' => 'egr', 'Eucgr.K01706' => 'egr', 'FAN01G2617' => 'fan', 'FAN02G3433' => 'fan', 'FAN03G3134' => 'fan', 'FAN04G2859' => 'fan', 'FAN05G0484' => 'fan', 'FAN05G1269' => 'fan', 'FAN06G4705' => 'fan', 'FAN08G0209' => 'fan', 'FAN09G0336' => 'fan', 'FAN10G3375' => 'fan', 'FAN11G1791' => 'fan', 'FAN11G3621' => 'fan', 'FAN13G2203' => 'fan', 'FAN14G1525' => 'fan', 'FAN15G2634' => 'fan', 'FAN15G3224' => 'fan', 'FAN16G3192' => 'fan', 'FAN18G4328' => 'fan', 'FAN20G0493' => 'fan', 'FAN20G1982' => 'fan', 'FAN21G1499' => 'fan', 'FAN24G0840' => 'fan', 'FAN24G2708' => 'fan', 'FAN25G0828' => 'fan', 'FAN25G2216' => 'fan', 'FAN27G1064' => 'fan', 'FAN27G1335' => 'fan', 'FvH4_2g05900' => 'fve', 'FvH4_2g34330' => 'fve', 'FvH4_3g24780' => 'fve', 'FvH4_3g24800' => 'fve', 'FvH4_3g24810' => 'fve', 'FvH4_5g38360' => 'fve', 'FvH4_6g18510' => 'fve', 'FvH4_7g04850' => 'fve', 'Glyma.02G131700' => 'gma', 'Glyma.03G003400' => 'gma', 'Glyma.04G022100' => 'gma', 'Glyma.04G039300' => 'gma', 'Glyma.04G124200' => 'gma', 'Glyma.05G079800' => 'gma', 'Glyma.05G122400' => 'gma', 'Glyma.06G022300' => 'gma', 'Glyma.06G040400' => 'gma', 'Glyma.06G314400' => 'gma', 'Glyma.07G213100' => 'gma', 'Glyma.08G183600' => 'gma', 'Glyma.08G227000' => 'gma', 'Glyma.10G071700' => 'gma', 'Glyma.12G184432' => 'gma', 'Glyma.13G075000' => 'gma', 'Glyma.13G153200' => 'gma', 'Glyma.13G317000' => 'gma', 'Glyma.14G167100' => 'gma', 'Glyma.15G049000' => 'gma', 'Glyma.15G222400' => 'gma', 'Glyma.19G067900' => 'gma', 'Glyma.19G122800' => 'gma', 'Glyma.19G194500' => 'gma', 'Glyma.20G049200' => 'gma', 'Gohir.A01G175600' => 'ghi', 'Gohir.A01G206900' => 'ghi', 'Gohir.A03G078424' => 'ghi', 'Gohir.A03G188600' => 'ghi', 'Gohir.A03G210400' => 'ghi', 'Gohir.A05G203000' => 'ghi', 'Gohir.A05G261700' => 'ghi', 'Gohir.A05G285200' => 'ghi', 'Gohir.A05G285300' => 'ghi', 'Gohir.A06G039866' => 'ghi', 'Gohir.A09G095200' => 'ghi', 'Gohir.A09G139000' => 'ghi', 'Gohir.A10G118550' => 'ghi', 'Gohir.A12G023700' => 'ghi', 'Gohir.A13G040900' => 'ghi', 'Gohir.A13G222800' => 'ghi', 'Gohir.A13G230200' => 'ghi', 'Gohir.D01G166500' => 'ghi', 'Gohir.D01G196300' => 'ghi', 'Gohir.D02G091300' => 'ghi', 'Gohir.D02G209300' => 'ghi', 'Gohir.D02G232000' => 'ghi', 'Gohir.D05G206200' => 'ghi', 'Gohir.D05G263900' => 'ghi', 'Gohir.D05G286200' => 'ghi', 'Gohir.D05G286300' => 'ghi', 'Gohir.D06G040800' => 'ghi', 'Gohir.D07G017750' => 'ghi', 'Gohir.D09G094900' => 'ghi', 'Gohir.D09G135600' => 'ghi', 'Gohir.D12G024400' => 'ghi', 'Gohir.D13G039600' => 'ghi', 'Gohir.D13G227800' => 'ghi', 'Gohir.D13G235700' => 'ghi', 'Gorai.001G018500' => 'gra', 'Gorai.002G207000' => 'gra', 'Gorai.002G240500' => 'gra', 'Gorai.005G102300' => 'gra', 'Gorai.005G237400' => 'gra', 'Gorai.005G259700' => 'gra', 'Gorai.006G111600' => 'gra', 'Gorai.006G155600' => 'gra', 'Gorai.008G024700' => 'gra', 'Gorai.009G212600' => 'gra', 'Gorai.009G275700' => 'gra', 'Gorai.009G301200' => 'gra', 'Gorai.009G301400' => 'gra', 'Gorai.010G045600' => 'gra', 'Gorai.013G044500' => 'gra', 'Gorai.013G258300' => 'gra', 'Gorai.013G266400' => 'gra', 'GSVIVG01000887001' => 'vvi', 'GSVIVG01001940001' => 'vvi', 'GSVIVG01008961001' => 'vvi', 'GSVIVG01009485001' => 'vvi', 'GSVIVG01023089001' => 'vvi', 'GSVIVG01031730001' => 'vvi', 'GSVIVG01033216001' => 'vvi', 'GSVIVG01033832001' => 'vvi', 'GSVIVG01036137001' => 'vvi', 'GSVIVG01037434001' => 'vvi', 'HanXRQChr02g0039501' => 'han', 'HanXRQChr04g0103511' => 'han', 'HanXRQChr04g0125451' => 'han', 'HanXRQChr05g0136811' => 'han', 'HanXRQChr05g0159481' => 'han', 'HanXRQChr06g0177991' => 'han', 'HanXRQChr08g0229931' => 'han', 'HanXRQChr09g0267551' => 'han', 'HanXRQChr10g0291921' => 'han', 'HanXRQChr10g0293101' => 'han', 'HanXRQChr10g0293131' => 'han', 'HanXRQChr11g0323821' => 'han', 'HanXRQChr11g0331351' => 'han', 'HanXRQChr13g0403091' => 'han', 'HanXRQChr13g0406441' => 'han', 'Haze_00546' => 'cav', 'Haze_03382' => 'cav', 'Haze_10089' => 'cav', 'Haze_18018' => 'cav', 'Haze_19600' => 'cav', 'Haze_23689' => 'cav', 'Hma1.2p1_0084F.1_g043680' => 'hma', 'Hma1.2p1_0218F.1_g092830' => 'hma', 'Hma1.2p1_0360F.1_g135560' => 'hma', 'Hma1.2p1_0474F.1_g160450' => 'hma', 'Hma1.2p1_0529F.1_g173140' => 'hma', 'Hma1.2p1_0776F.1_g216640' => 'hma', 'Hma1.2p1_1106F.1_g257660' => 'hma', 'Hma1.2p1_1106F.1_g257670' => 'hma', 'Hma1.2p1_1712F.1_g298820' => 'hma', 'Hma1.2p1_2046F.1_g312403' => 'hma', 'HPP92_000067' => 'vpl', 'HPP92_000657' => 'vpl', 'HPP92_000689' => 'vpl', 'HPP92_006807' => 'vpl', 'HPP92_010972' => 'vpl', 'HPP92_016718' => 'vpl', 'HPP92_018988' => 'vpl', 'HPP92_019358' => 'vpl', 'Hund01340' => 'sun', 'Hund19046' => 'sun', 'Hund23865' => 'sun', 'Lalb_Chr00c36g0408731' => 'lal', 'Lalb_Chr01g0007601' => 'lal', 'Lalb_Chr01g0018181' => 'lal', 'Lalb_Chr01g0018191' => 'lal', 'Lalb_Chr02g0157611' => 'lal', 'Lalb_Chr03g0032521' => 'lal', 'Lalb_Chr04g0249601' => 'lal', 'Lalb_Chr08g0245401' => 'lal', 'Lalb_Chr09g0328371' => 'lal', 'Lalb_Chr10g0102071' => 'lal', 'Lalb_Chr11g0062621' => 'lal', 'Lalb_Chr14g0365181' => 'lal', 'Lalb_Chr16g0384771' => 'lal', 'Lalb_Chr19g0132611' => 'lal', 'Lalb_Chr21g0317361' => 'lal', 'Lalb_Chr22g0358261' => 'lal', 'Lalb_Chr24g0392951' => 'lal', 'Lalb_Chr25g0288361' => 'lal', 'Lj1g0002923' => 'lja', 'Lj1g0017372' => 'lja', 'Lj1g0026220' => 'lja', 'Lj1g0027512' => 'lja', 'Lj2C935T9' => 'lonja', 'Lj2P135T34' => 'lonja', 'Lj2P414T22' => 'lonja', 'Lj3g0019182' => 'lja', 'Lj3g0022692' => 'lja', 'Lj3P998T16' => 'lonja', 'Lj4C59T7' => 'lonja', 'Lj4g0003121' => 'lja', 'Lj4g0020157' => 'lja', 'Lj4P772T18' => 'lonja', 'Lj5g0006001' => 'lja', 'Lj5P210T22' => 'lonja', 'Lj9A313T48' => 'lonja', 'Lj9P315T11' => 'lonja', 'LjContig00430g0025339' => 'lja', 'LjContig00564g0022059' => 'lja', 'Lsat_1_v5_gn_0_25001' => 'lsa', 'Lsat_1_v5_gn_1_21140' => 'lsa', 'Lsat_1_v5_gn_1_58721' => 'lsa', 'Lsat_1_v5_gn_4_126380' => 'lsa', 'Lsat_1_v5_gn_4_170641' => 'lsa', 'Lsat_1_v5_gn_5_154320' => 'lsa', 'Lsat_1_v5_gn_7_86800' => 'lsa', 'Lsat_1_v5_gn_8_85300' => 'lsa', 'Lsat_1_v5_gn_8_86021' => 'lsa', 'Lsat_1_v5_gn_9_103141' => 'lsa', 'Lsat_1_v5_gn_9_111061' => 'lsa', 'Lsat_1_v5_gn_9_111140' => 'lsa', 'Lsat_1_v5_gn_9_20500' => 'lsa', 'Lsat_1_v5_gn_9_30361' => 'lsa', 'Manes.04G004300' => 'mes', 'Manes.05G174500' => 'mes', 'Manes.08G024700' => 'mes', 'Manes.09G056100' => 'mes', 'Manes.10G080700' => 'mes', 'Manes.11G161300' => 'mes', 'Manes.18G037900' => 'mes', 'Manes.18G048100' => 'mes', 'Manes.18G071600' => 'mes', 'Mapoly0069s0009' => 'mpo', 'Mapoly0072s0050' => 'mpo', 'MBI02_g13005_MAGBIO' => 'mbi', 'MBI03_g13475_MAGBIO' => 'mbi', 'MBI06_g02567_MAGBIO' => 'mbi', 'MBI13_g00560_MAGBIO' => 'mbi', 'MBI17_g24537_MAGBIO' => 'mbi', 'MBI17_g33113_MAGBIO' => 'mbi', 'MBI17_g46821_MAGBIO' => 'mbi', 'MBI19_g34003_MAGBIO' => 'mbi', 'MBI19_g34994_MAGBIO' => 'mbi', 'MD02G1266800' => 'mdo', 'MD03G1143300' => 'mdo', 'MD05G1082000' => 'mdo', 'MD07G1052500' => 'mdo', 'MD08G1099600' => 'mdo', 'MD08G1174300' => 'mdo', 'MD12G1024200' => 'mdo', 'MD12G1024300' => 'mdo', 'MD12G1034900' => 'mdo', 'MD14G1021600' => 'mdo', 'MD15G1081800' => 'mdo', 'Medtr2g086340' => 'mtr', 'Medtr2g086390' => 'mtr', 'Medtr3g010660' => 'mtr', 'Medtr3g101780' => 'mtr', 'Medtr4g085910' => 'mtr', 'Medtr4g094390' => 'mtr', 'Medtr5g060990' => 'mtr', 'Medtr5g088230' => 'mtr', 'Medtr6g026800' => 'mtr', 'Medtr7g088090' => 'mtr', 'Medtr7g104480' => 'mtr', 'Medtr8g043960' => 'mtr', 'MELO3C010435.2' => 'cme', 'MELO3C010850.2' => 'cme', 'MELO3C015611.2' => 'cme', 'MELO3C018458.2' => 'cme', 'MELO3C019925.2' => 'cme', 'MELO3C021421.2' => 'cme', 'MELO3C021423.2' => 'cme', 'Migut.B00355' => 'egut', 'Migut.C00572' => 'egut', 'Migut.J01048' => 'egut', 'Migut.J01594' => 'egut', 'Migut.K00199' => 'egut', 'Migut.L01774' => 'egut', 'Migut.N02398' => 'egut', 'Migut.N02712' => 'egut', 'MSTRG.10758' => 'ama', 'MSTRG.1163' => 'ama', 'MSTRG.1353' => 'ama', 'MSTRG.16735' => 'ama', 'MSTRG.17646' => 'ama', 'MSTRG.19255' => 'ama', 'MSTRG.20160' => 'ama', 'MSTRG.22260' => 'ama', 'MSTRG.24334' => 'ama', 'MSTRG.25088' => 'ama', 'MSTRG.25089' => 'ama', 'MSTRG.26201' => 'ama', 'MSTRG.26642' => 'ama', 'MSTRG.27728' => 'ama', 'MSTRG.6260' => 'ama', 'Nitab4.5_0000088g0120' => 'nta', 'Nitab4.5_0000123g0060' => 'nta', 'Nitab4.5_0000287g0240' => 'nta', 'Nitab4.5_0000613g0150' => 'nta', 'Nitab4.5_0000811g0030' => 'nta', 'Nitab4.5_0001428g0140' => 'nta', 'Nitab4.5_0001692g0020' => 'nta', 'Nitab4.5_0001725g0110' => 'nta', 'Nitab4.5_0002131g0060' => 'nta', 'Nitab4.5_0002501g0020' => 'nta', 'Nitab4.5_0002543g0050' => 'nta', 'Nitab4.5_0002760g0050' => 'nta', 'Nitab4.5_0002915g0050' => 'nta', 'Nitab4.5_0003080g0080' => 'nta', 'Nitab4.5_0007480g0030' => 'nta', 'Nitab4.5_0007873g0010' => 'nta', 'Nitab4.5_0007873g0020' => 'nta', 'Nitab4.5_0021113g0010' => 'nta', 'Nn1g04839' => 'nnu', 'Nn1g05228' => 'nnu', 'Nn1g06071' => 'nnu', 'Nn2g14144' => 'nnu', 'Nn2g14613' => 'nnu', 'Nn5g28759' => 'nnu', 'Nn5g28963' => 'nnu', 'Nn5g30287' => 'nnu', 'Nn6g34921' => 'nnu', 'Nn7g37256' => 'nnu', 'Oeu007291.1' => 'oeu', 'Oeu009222.1' => 'oeu', 'Oeu012420.3' => 'oeu', 'Oeu013716.1' => 'oeu', 'Oeu014896.2' => 'oeu', 'Oeu025944.1' => 'oeu', 'Oeu032042.1' => 'oeu', 'Oeu032649.1' => 'oeu', 'Oeu034904.1' => 'oeu', 'Oeu034905.1' => 'oeu', 'Oeu039193.1' => 'oeu', 'Oeu039194.1' => 'oeu', 'Oeu044216.1' => 'oeu', 'Oeu044311.2' => 'oeu', 'Oeu049987.2' => 'oeu', 'Oeu056890.1' => 'oeu', 'Oeu062531.2' => 'oeu', 'Os01g0813100' => 'osa', 'Os01g0859300' => 'osa', 'Os02g0766700' => 'osa', 'Os03g0144951' => 'osa', 'Os03g0322700' => 'osa', 'Os05g0489700' => 'osa', 'Os06g0211200' => 'osa', 'Os07g0686100' => 'osa', 'Os08g0472000' => 'osa', 'Os09g0456200' => 'osa', 'Peaxi162Scf00003g02333' => 'pax', 'Peaxi162Scf00003g05367' => 'pax', 'Peaxi162Scf00010g00283' => 'pax', 'Peaxi162Scf00010g02811' => 'pax', 'Peaxi162Scf00016g01934' => 'pax', 'Peaxi162Scf00050g01715' => 'pax', 'Peaxi162Scf00050g01717' => 'pax', 'Peaxi162Scf00152g00029' => 'pax', 'Peaxi162Scf00252g00228' => 'pax', 'Peaxi162Scf00290g00115' => 'pax', 'Peaxi162Scf00575g00618' => 'pax', 'PGR004G2014' => 'pgr', 'PGR031G0234' => 'pgr', 'PGR042G0119' => 'pgr', 'PGR044G2422' => 'pgr', 'PGR102G0213' => 'pgr', 'PGR119G0685' => 'pgr', 'PGR142G1180' => 'pgr', 'PGR142G3084' => 'pgr', 'PGSC0003DMG400002660' => 'stu', 'PGSC0003DMG400006211' => 'stu', 'PGSC0003DMG400007208' => 'stu', 'PGSC0003DMG400008011' => 'stu', 'PGSC0003DMG400022706' => 'stu', 'PGSC0003DMG400022931' => 'stu', 'PGSC0003DMG400025889' => 'stu', 'PGSC0003DMG400028121' => 'stu', 'Phvul.001G101000' => 'pvu', 'Phvul.001G189400' => 'pvu', 'Phvul.003G291800' => 'pvu', 'Phvul.004G047600' => 'pvu', 'Phvul.004G053300' => 'pvu', 'Phvul.005G011600' => 'pvu', 'Phvul.005G124200' => 'pvu', 'Phvul.006G021900' => 'pvu', 'Phvul.006G211201' => 'pvu', 'Phvul.007G229600' => 'pvu', 'Phvul.008G169100' => 'pvu', 'Phvul.009G065500' => 'pvu', 'Phvul.011G186800' => 'pvu', 'Potri.001G220700' => 'ptr', 'Potri.002G090800' => 'ptr', 'Potri.002G125400' => 'ptr', 'Potri.004G140600' => 'ptr', 'Potri.006G025800' => 'ptr', 'Potri.006G083000' => 'ptr', 'Potri.008G010800' => 'ptr', 'Potri.009G018500' => 'ptr', 'Potri.009G101200' => 'ptr', 'Potri.009G164500' => 'ptr', 'Potri.010G248100' => 'ptr', 'Potri.010G248300' => 'ptr', 'Potri.014G028200' => 'ptr', 'Potri.016G024000' => 'ptr', 'Pp3c20_7230' => 'ppa', 'Pp3c20_7290' => 'ppa', 'Pp3c23_19420' => 'ppa', 'Pp3c8_25350' => 'ppa', 'PRCOL_00001488' => 'pco', 'Prupe.1G434500' => 'ppe', 'Prupe.1G508200' => 'ppe', 'Prupe.2G056800' => 'ppe', 'Prupe.5G033700' => 'ppe', 'Prupe.6G128900' => 'ppe', 'Prupe.6G156000' => 'ppe', 'Prupe.7G112200' => 'ppe', 'Prupe.8G126600' => 'ppe', 'Psat0s2281g0240' => 'psa', 'Psat1g087440' => 'psa', 'Psat2g076720' => 'psa', 'Psat3g033680' => 'psa', 'Psat3g083400' => 'psa', 'Psat4g141680' => 'psa', 'Psat5g042560' => 'psa', 'Psat5g225680' => 'psa', 'Psat5g257120' => 'psa', 'Psat7g122760' => 'psa', 'PSO170G1163' => 'pso', 'PSO210G5664' => 'pso', 'PSO210G6648' => 'pso', 'PSO339G0899' => 'pso', 'PSO339G1986' => 'pso', 'PSO339G4580' => 'pso', 'PSO384G1540' => 'pso', 'PSO384G4223' => 'pso', 'PSO447G0105' => 'pso', 'QL01p007456' => 'qlo', 'QL02p004686' => 'qlo', 'QL04p051667' => 'qlo', 'QL07p015590' => 'qlo', 'QL07p039212' => 'qlo', 'QL11p019034' => 'qlo', 'QL11p035395' => 'qlo', 'QL12p035540' => 'qlo', 'RcHm_v2.0_Chr1g0330441' => 'rch', 'RcHm_v2.0_Chr3g0473071' => 'rch', 'RcHm_v2.0_Chr5g0044361' => 'rch', 'RcHm_v2.0_Chr5g0044371' => 'rch', 'RcHm_v2.0_Chr6g0257641' => 'rch', 'RcHm_v2.0_Chr6g0308031' => 'rch', 'RcHm_v2.0_Chr7g0240381' => 'rch', 'Rhsim03G0076000' => 'rsi', 'Rhsim05G0085200' => 'rsi', 'Rhsim05G0085600' => 'rsi', 'Rhsim06G0050700' => 'rsi', 'Rhsim07G0228100' => 'rsi', 'Rhsim11G0132800' => 'rsi', 'Rhsim11G0165000' => 'rsi', 'Rhsim13G0111000' => 'rsi', 'RhsimUnG0021700' => 'rsi', 'Sabra02G0071800' => 'sbr', 'Sabra02G0098400' => 'sbr', 'Sabra04G0137600' => 'sbr', 'Sabra05G0128000' => 'sbr', 'Sabra06G0062700' => 'sbr', 'Sabra08G0006500' => 'sbr', 'Sabra09G0010300' => 'sbr', 'Sabra09G0077000' => 'sbr', 'Sabra09G0128700' => 'sbr', 'Sabra10G0193500' => 'sbr', 'Sabra10G0193700' => 'sbr', 'Sabra14G0019300' => 'sbr', 'Sabra16G0022000' => 'sbr', 'Sabra16G0123800' => 'sbr', 'Sabra16G0131300' => 'sbr', 'SalBow3G1610' => 'sbo', 'SalBow6G2215' => 'sbo', 'SalBow6G4932' => 'sbo', 'SalBow6G6791' => 'sbo', 'SalBow7G2129' => 'sbo', 'Sc02g0007180' => 'sci', 'Sc09g0004990' => 'sci', 'Sc13g0000680' => 'sci', 'Sc15g0003040' => 'sci', 'Sc15g0006100' => 'sci', 'Sc19g0007760' => 'sci', 'Sc20g0006240' => 'sci', 'Sed0000327' => 'sed', 'Sed0006901' => 'sed', 'Sed0011326' => 'sed', 'Sed0012090' => 'sed', 'Sed0014567' => 'sed', 'Sed0015009' => 'sed', 'Sed0016431' => 'sed', 'Sed0017762' => 'sed', 'Sed0018127' => 'sed', 'Sed0022838' => 'sed', 'Sed0025294' => 'sed', 'Sed0025516' => 'sed', 'Sed0026336' => 'sed', 'SEGI_03507' => 'sgi', 'SEGI_05402' => 'sgi', 'SEGI_15867' => 'sgi', 'SEGI_27753' => 'sgi', 'SEGI_29482' => 'sgi', 'SEGI_34065' => 'sgi', 'SGA_v2.0_scaffold13G06732' => 'sas', 'SGA_v2.0_scaffold14G06997' => 'sas', 'SGA_v2.0_scaffold17G08000' => 'sas', 'SGA_v2.0_scaffold184G39958' => 'sas', 'SGA_v2.0_scaffold32G13059' => 'sas', 'SGA_v2.0_scaffold75G24754' => 'sas', 'SGA_v2.0_scaffold79G25550' => 'sas', 'SGA_v2.0_scaffold90G27633' => 'sas', 'SHI08267' => 'shi', 'SHI21217' => 'shi', 'SMO117G0079' => 'smo', 'SMO171G0111' => 'smo', 'SMO203G0098' => 'smo', 'SMO351G0545' => 'smo', 'SMO353G0031' => 'smo', 'Solyc01g008980.3' => 'sly', 'Solyc01g009510.2' => 'sly', 'Solyc01g108080.4' => 'sly', 'Solyc04g078840.3' => 'sly', 'Solyc09g009490.4' => 'sly', 'Solyc10g050210.3' => 'sly', 'Solyc10g076920.3' => 'sly', 'Solyc10g081350.2' => 'sly', 'Solyc11g044560.3' => 'sly', 'Sopen01g004470' => 'spe', 'Sopen01g005060' => 'spe', 'Sopen01g050310' => 'spe', 'Sopen04g032440' => 'spe', 'Sopen09g004230' => 'spe', 'Sopen10g021360' => 'spe', 'Sopen10g028610' => 'spe', 'Sopen10g031850' => 'spe', 'Sopen11g020170' => 'spe', 'Sp1g34100' => 'spa', 'Sp1g36610' => 'spa', 'Sp2g07650' => 'spa', 'Sp3g17370' => 'spa', 'Sp4g18490' => 'spa', 'Sp4g23400' => 'spa', 'Sp5g05740' => 'spa', 'Sp5g16760' => 'spa', 'Sp7g31740' => 'spa', 'TAR041G0002' => 'tar', 'TAR376G0712' => 'tar', 'TAR376G0969' => 'tar', 'TAR381G0354' => 'tar', 'TAR381G0951' => 'tar', 'TAR623G1246' => 'tar', 'TAR625G0734' => 'tar', 'TAR625G1406' => 'tar', 'TAR628G1582' => 'tar', 'TAR633G1290' => 'tar', 'TAR633G1346' => 'tar', 'TAR636G0139' => 'tar', 'TAR636G0470' => 'tar', 'THA.LOC104801768' => 'tha', 'THA.LOC104803248' => 'tha', 'THA.LOC104803250' => 'tha', 'THA.LOC104803251' => 'tha', 'THA.LOC104803302' => 'tha', 'THA.LOC104803304' => 'tha', 'THA.LOC104807267' => 'tha', 'THA.LOC104810916' => 'tha', 'THA.LOC104812572' => 'tha', 'THA.LOC104819575' => 'tha', 'THA.LOC104821606' => 'tha', 'THA.LOC104822852' => 'tha', 'THA.LOC104824201' => 'tha', 'THA.LOC104824391' => 'tha', 'THA.LOC104824465' => 'tha', 'THA.LOC104826470' => 'tha', 'Thecc.02G042400' => 'tca', 'Thecc.02G101700' => 'tca', 'Thecc.05G088000' => 'tca', 'Thecc.08G005900' => 'tca', 'Thecc.08G114900' => 'tca', 'Thecc.09G284800' => 'tca', 'Thecc.09G339000' => 'tca', 'Thecc.10G131000' => 'tca', 'Thhalv10003386m.g' => 'esa', 'Thhalv10006121m.g' => 'esa', 'Thhalv10011159m.g' => 'esa', 'Thhalv10011493m.g' => 'esa', 'Thhalv10012271m.g' => 'esa', 'Thhalv10016668m.g' => 'esa', 'Thhalv10017050m.g' => 'esa', 'Thhalv10020772m.g' => 'esa', 'Thhalv10025203m.g' => 'esa', 'TPR.G11327' => 'tpr', 'TPR.G12569' => 'tpr', 'TPR.G19539' => 'tpr', 'TPR.G19547' => 'tpr', 'TPR.G23695' => 'tpr', 'TPR.G24191' => 'tpr', 'TPR.G25014' => 'tpr', 'TPR.G30423' => 'tpr', 'TPR.G33923' => 'tpr', 'TPR.G36392' => 'tpr', 'TPR.G4464' => 'tpr', 'TPR.G5132' => 'tpr', 'TWI15G1242' => 'twi', 'TWI31G0571' => 'twi', 'TWI36G0579' => 'twi', 'TWI36G0626' => 'twi', 'TWI36G1038' => 'twi', 'TWI38G1329' => 'twi', 'TWI53G1058' => 'twi', 'TWI56G0987' => 'twi', 'TWI56G1277' => 'twi', 'TWI63G0520' => 'twi', 'TWI74G1017' => 'twi', 'TWI74G1234' => 'twi', 'TWI77G0193' => 'twi', 'TWI77G0738' => 'twi', 'TWI79G0167' => 'twi', 'TWI79G0170' => 'twi', 'TWI79G1767' => 'twi', 'unitig_0.g86' => 'ugi', 'unitig_22.g6180' => 'ugi', 'unitig_26.g10022' => 'ugi', 'unitig_37.g12765' => 'ugi', 'unitig_46.g18482' => 'ugi', 'unitig_749.g13679' => 'ugi', 'unitig_899.g15203' => 'ugi', 'unitig_899.g15549' => 'ugi', 'unitig_899.g15625' => 'ugi', 'vmacro01795' => 'vma', 'vmacro02041' => 'vma', 'vmacro04446' => 'vma', 'vmacro07404' => 'vma', 'vmacro07601' => 'vma', 'vmacro14281' => 'vma', 'VMungo0251G0140' => 'vmu', 'VMungo0251G1704' => 'vmu', 'VMungo0464G2106' => 'vmu', 'VMungo0540G1779' => 'vmu', 'VMungo0540G2149' => 'vmu', 'VMungo0647G0532' => 'vmu', 'VMungo0720G0533' => 'vmu', 'VMungo1080G0127' => 'vmu', 'VMungo1080G1547' => 'vmu', 'VMungo1127G0147' => 'vmu', 'VMungo1309G0199' => 'vmu', 'VMungo1383G2586' => 'vmu', 'VMungo1383G2950' => 'vmu', 'Zm00001eb038010' => 'zma', 'Zm00001eb100750' => 'zma', 'Zm00001eb147240' => 'zma', 'Zm00001eb150010' => 'zma', 'Zm00001eb176680' => 'zma', 'Zm00001eb255970' => 'zma', 'Zm00001eb279120' => 'zma', 'Zm00001eb314860' => 'zma', 'Zm00001eb331250' => 'zma', 'Zm00001eb331880' => 'zma', 'Zm00001eb352240' => 'zma', 'Zm00001eb366900' => 'zma', 'Zm00001eb369160' => 'zma', 'Zm00001eb373300' => 'zma' ) $gf_id = 'HOM05D000531' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000531' ) $data_identifier = 'HOM05D000531' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 32, 'aar' => (int) 8, 'aag' => (int) 1, 'ach' => (int) 14, 'amhyb' => (int) 8, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 13, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 8, 'cqu' => (int) 9, 'bca' => (int) 28, 'bol' => (int) 17, 'bra' => (int) 17, 'can' => (int) 7, 'cansat' => (int) 6, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 12, 'cfa' => (int) 4, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 8, 'col' => (int) 8, 'cpa' => (int) 7, 'csa' => (int) 9, 'camsi' => (int) 8, 'dca' => (int) 12, 'din' => (int) 14, 'dzi' => (int) 17, 'eca' => (int) 6, 'bvu' => (int) 5, 'egr' => (int) 9, 'fan' => (int) 27, 'fve' => (int) 8, 'gma' => (int) 25, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 10, 'han' => (int) 15, 'cav' => (int) 6, 'hma' => (int) 10, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 18, 'lja' => (int) 11, 'lonja' => (int) 9, 'lsa' => (int) 14, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 9, 'mdo' => (int) 11, 'mtr' => (int) 12, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 15, 'nta' => (int) 18, 'nnu' => (int) 10, 'oeu' => (int) 17, 'osa' => (int) 10, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 8, 'pvu' => (int) 13, 'ptr' => (int) 14, 'ppa' => (int) 4, 'pco' => (int) 1, 'ppe' => (int) 8, 'psa' => (int) 10, 'pso' => (int) 9, 'qlo' => (int) 8, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 15, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 13, 'sgi' => (int) 6, 'sas' => (int) 8, 'shi' => (int) 2, 'smo' => (int) 5, 'sly' => (int) 9, 'spe' => (int) 9, 'spa' => (int) 9, 'tar' => (int) 13, 'tha' => (int) 16, 'tca' => (int) 8, 'esa' => (int) 9, 'tpr' => (int) 12, 'twi' => (int) 17, 'ugi' => (int) 9, 'vma' => (int) 6, 'vmu' => (int) 13, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb373300' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1